C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: integrator complex subunit 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000108319 Ints8-001 ENSMUSG00000040738 10090 - 4:11204383-11254258 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000108319
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000108319 4.991±2.42 6.977±0.22 7.945±4.21 1.595±0.83 3.036±1.18 1.730±0.64 1.885±0.72 5.510±4.53 4.409±2.82 2.651±0.54 5.612±3.09 8.355±2.45 3.863±1.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000WT CIL_0000WT_0002 CGP 4:11156431-11204779

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0016180 ISS snRNA processing
GO:0032039 ISS integrator complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000343161 INTS8-004 nonsense_mediated_decay Homo_sapiens 0 2876
ENST00000517918 INTS8-013 processed_transcript Homo_sapiens 0 472
ENST00000519053 INTS8-009 protein_coding Homo_sapiens 0 316
ENST00000519457 INTS8-010 protein_coding Homo_sapiens 0 483
ENST00000519736 INTS8-015 retained_intron Homo_sapiens 0 353
ENST00000520315 INTS8-018 nonsense_mediated_decay Homo_sapiens 0 477
ENST00000520509 CCNE2-001 protein_coding Homo_sapiens 0 268
ENST00000520526 INTS8-006 protein_coding Homo_sapiens 0 2708
ENST00000520845 INTS8-012 processed_transcript Homo_sapiens 3e-40 169
ENST00000520853 INTS8-014 retained_intron Homo_sapiens 3e-33 145
ENST00000521155 INTS8-016 retained_intron Homo_sapiens 0 640
ENST00000521860 INTS8-008 protein_coding Homo_sapiens 0 521
ENST00000522171 INTS8-011 protein_coding Homo_sapiens 0 664
ENST00000522261 INTS8-017 retained_intron Homo_sapiens 1e-25 121
ENST00000523206 INTS8-005 nonsense_mediated_decay Homo_sapiens 0 1984
ENST00000523321 INTS8-003 retained_intron Homo_sapiens 0 2623
ENST00000523352 INTS8-019 retained_intron Homo_sapiens 0 316
ENST00000523731 INTS8-001 protein_coding Homo_sapiens 0 3965
ENST00000523808 INTS8-007 protein_coding Homo_sapiens 0 316
ENST00000523998 INTS8-020 retained_intron Homo_sapiens 1e-33 147
ENST00000524333 INTS8-002 nonsense_mediated_decay Homo_sapiens 0 1864

Loading