C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromodomain protein, Y chromosome-like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000109102 Cdyl2-201 ENSMUSG00000031758 10090 - 8:116568724-116732991 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000109102
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000109102 1.137±0.13 0.992±0.12 0.806±0.05 0.944±0.22 0.955±0.31 0.433±0.05 0.569±0.08 0.835±0.13 0.368±0.08 1.587±0.09 0.426±0.09 0.879±0.16 0.573±0.20 0.934±0.69

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008MS CIL_0008MS_0002 VISTA 8:116035144-116637629
CIL_0008HN CIL_0008HN_0002 VISTA 8:116084137-116685431
CIL_0001Q8 CIL_0001Q8_0002 CGP 8:116505015-116732991
CIL_0001PZ CIL_0001PZ_0002 CGP 8:116568724-116921455

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0008150 ND biological_process
GO:0008152 IEA metabolic process
GO:0035064 IDA methylated histone binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000561616 CDYL2-006 protein_coding Homo_sapiens 0 749
ENST00000562812 CDYL2-004 protein_coding Homo_sapiens 0 1825
ENST00000563890 CDYL2-002 protein_coding Homo_sapiens 0 1825
ENST00000566173 CDYL2-003 protein_coding Homo_sapiens 0 1825
ENST00000567924 CDYL2-007 processed_transcript Homo_sapiens 0 209
ENST00000570137 CDYL2-001 protein_coding Homo_sapiens 0 2132

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