C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ADP-ribosylation factor-like 2 binding protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000109527 Arl2bp-202 ENSMUSG00000031776 10090 + 8:94667226-94674417 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000109527
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000109527 21.573±2.65 14.031±0.00 20.712±4.21 28.671±16.35 17.561±5.54 9.427±4.14 1.257±0.75 37.324±19.20 15.587±2.66 27.742±12.48 11.847±6.25 17.549±2.60

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000490 CIL_000490_0002 CGP 8:94601955-94674417
CIL_00048Z CIL_00048Z_0002 CGP 8:94666755-94696242

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003713 ISS transcription coactivator activity
GO:0005083 ISO small GTPase regulator activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005929 IEA cilium
GO:0042517 ISS positive regulation of tyrosine phosphorylation of Stat3 protein
GO:0050790 ISO regulation of catalytic activity
GO:0051457 ISS maintenance of protein location in nucleus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000219204 ARL2BP-001 protein_coding Homo_sapiens 0 551
ENST00000540773 RP1-267D11.1-001 processed_pseudogene Homo_sapiens 8e-31 135
ENST00000550907 ARL2BPP2-001 processed_pseudogene Homo_sapiens 0 350
ENST00000562023 ARL2BP-005 protein_coding Homo_sapiens 3e-21 106
ENST00000563234 ARL2BP-002 protein_coding Homo_sapiens 0 412
ENST00000564376 PLLP-005 processed_transcript Homo_sapiens 7e-26 121
ENST00000565794 ARL2BP-004 processed_transcript Homo_sapiens 1e-21 106
ENST00000576706 ARL2BPP8-001 processed_pseudogene Homo_sapiens 0 272
ENST00000613167 PLLP-004 protein_coding Homo_sapiens 5e-34 152

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