C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: galactose-3-O-sulfotransferase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000109981 Gal3st1-003 ENSMUSG00000049721 10090 + 11:3989933-3999308 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000109981
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000109981 2.054±0.08 0.233±0.06 1.561±0.07 1.033±0.15 0.364±0.23 30.196±5.59 0.192±0.08 15.870±7.07 1.183±1.02 6.523±1.83 0.173±0.07 1.552±0.62 1.030±0.84

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006F8 CIL_0006F8_0002 CGP 11:3963975-3999326

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0001733 IDA galactosylceramide sulfotransferase activity
GO:0006682 IDA galactosylceramide biosynthetic process
GO:0007283 IMP spermatogenesis
GO:0009247 TAS glycolipid biosynthetic process
GO:0016021 ISS integral component of membrane
GO:0042552 IMP myelination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000338911 GAL3ST1-201 protein_coding Homo_sapiens 0 1192
ENST00000401975 GAL3ST1-001 protein_coding Homo_sapiens 0 1192
ENST00000402321 GAL3ST1-003 protein_coding Homo_sapiens 0 1199
ENST00000402369 GAL3ST1-004 protein_coding Homo_sapiens 0 1192
ENST00000406361 GAL3ST1-002 protein_coding Homo_sapiens 0 1192
ENST00000406955 GAL3ST1-005 protein_coding Homo_sapiens 0 1192
ENST00000416358 GAL3ST1-012 protein_coding Homo_sapiens 0 403
ENST00000423299 GAL3ST1-016 protein_coding Homo_sapiens 0 372
ENST00000423371 GAL3ST1-011 protein_coding Homo_sapiens 0 233
ENST00000427899 GAL3ST1-018 protein_coding Homo_sapiens 0 377
ENST00000428682 GAL3ST1-009 protein_coding Homo_sapiens 0 222
ENST00000431313 GAL3ST1-007 protein_coding Homo_sapiens 0 693
ENST00000437282 GAL3ST1-020 protein_coding Homo_sapiens 0 496
ENST00000441967 GAL3ST1-023 protein_coding Homo_sapiens 0 758
ENST00000443136 GAL3ST1-015 protein_coding Homo_sapiens 0 359
ENST00000452827 GAL3ST1-017 protein_coding Homo_sapiens 0 640
ENST00000453479 GAL3ST1-021 protein_coding Homo_sapiens 0 213

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