C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000110167 Ndufa13-201 ENSMUSG00000036199 10090 - 8:69894188-69902558 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000110167
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000110167 56.604±11.31 39.191±7.85 82.990±8.51 83.661±56.29 52.626±27.00 74.316±18.83 205.220±31.88 142.102±27.23 69.163±21.19 47.361±1.28 244.743±6.05 53.770±24.13 59.844±22.53 58.113±13.64

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003954 IEA NADH dehydrogenase activity
GO:0005515 IEA protein binding
GO:0005654 ISS nucleoplasm
GO:0005737 ISS cytoplasm
GO:0005739 ISS mitochondrion
GO:0005746 ISS mitochondrial respiratory chain
GO:0005747 IEA mitochondrial respiratory chain complex I
GO:0008137 ISS NADH dehydrogenase (ubiquinone) activity
GO:0016021 IEA integral component of membrane
GO:0030308 ISS negative regulation of cell growth
GO:0031966 IEA mitochondrial membrane
GO:0035458 IEA cellular response to interferon-beta
GO:0043280 IEA positive regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0045039 IEA protein import into mitochondrial inner membrane
GO:0045732 IEA positive regulation of protein catabolic process
GO:0045892 ISS negative regulation of transcription, DNA-templated
GO:0055114 IEA oxidation-reduction process
GO:0070062 IEA extracellular vesicular exosome
GO:0071300 IEA cellular response to retinoic acid
GO:0072593 IEA reactive oxygen species metabolic process
GO:0097190 ISS apoptotic signaling pathway
GO:2001243 IEA negative regulation of intrinsic apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000585580 TSSK6-001 protein_coding Homo_sapiens 0 571
ENST00000587522 TSSK6-002 nonsense_mediated_decay Homo_sapiens 0 505

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