C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | huntingtin interacting protein K | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000110612  |
Hypk-005 |
ENSMUSG00000027245 |
10090 | + |
2:121453290-121458510  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007WI | CIL_0007WI_0002 | VISTA | 2:121250003-121852600 |
| CIL_00067W | CIL_00067W_0002 | CGP | 2:121453290-121474067 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003674 | ND | molecular_function |
| GO:0005575 | ND | cellular_component |
| GO:0005634 | IEA | nucleus |
| GO:0005737 | IEA | cytoplasm |
| GO:0008150 | ND | biological_process |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000299969
|
SERINC4-004 | protein_coding | Homo_sapiens | 0 | 228 |
|
ENST00000319327
|
SERINC4-001 | protein_coding | Homo_sapiens | 0 | 228 |
|
ENST00000406925
|
HYPK-007 | protein_coding | Homo_sapiens | 0 | 359 |
|
ENST00000417761
|
RP11-296A16.1-001 | nonsense_mediated_decay | Homo_sapiens | 1e-29 | 135 |
|
ENST00000448553
|
SERINC4-002 | nonsense_mediated_decay | Homo_sapiens | 0 | 235 |
|
ENST00000457418
|
SERINC4-003 | nonsense_mediated_decay | Homo_sapiens | 1e-29 | 135 |
|
ENST00000476490
|
SERINC4-006 | retained_intron | Homo_sapiens | 0 | 243 |
|
ENST00000620261
|
HYPK-201 | protein_coding | Homo_sapiens | 0 | 359 |
