C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | ||||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000417761  |
RP11-296A16.1-001 |
ENSG00000262560 |
9606 | - |
15:43772617-43799133  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007WI | CIL_0007WI_0001 | VISTA | 15:43579049-44181693 |
| CIL_00067X | CIL_00067X_0001 | CGP | 15:43746392-43777543 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0016020 | IEA | membrane |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000140752
|
Serinc4-005 | nonsense_mediated_decay | Mus_musculus | 0 | 1755 |
|
ENSMUST00000116432
|
Ell3-201 | protein_coding | Mus_musculus | 0 | 850 |
|
ENSMUST00000028679
|
Ell3-001 | protein_coding | Mus_musculus | 0 | 850 |
|
ENSMUST00000127435
|
Serinc4-006 | nonsense_mediated_decay | Mus_musculus | 0 | 577 |
|
ENSMUST00000056312
|
Serinc4-001 | protein_coding | Mus_musculus | 0 | 575 |
|
ENSMUST00000126678
|
Serinc4-004 | retained_intron | Mus_musculus | 0 | 315 |
|
ENSMUST00000140135
|
Serinc4-003 | nonsense_mediated_decay | Mus_musculus | 0 | 313 |
|
ENSMUST00000110613
|
Serinc4-002 | protein_coding | Mus_musculus | 0 | 307 |
|
ENSMUST00000134412
|
Serf2-002 | retained_intron | Mus_musculus | 9.80909e-45 | 185 |
|
ENSMUST00000139253
|
Serf2-001 | protein_coding | Mus_musculus | 9.80909e-45 | 185 |
|
ENSMUST00000110612
|
Hypk-005 | protein_coding | Mus_musculus | 1e-29 | 135 |
