C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: somatostatin receptor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000110671 Sstr1-001 ENSMUSG00000035431 10090 + 12:58211772-58213887 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000110671
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000110671 0.140±0.13 0.048±0.03 0.091±0.05 0.786±0.21 0.245±0.12 19.169±2.68 0.047±0.01 0.070±0.02 0.023±0.02 0.213±0.13 4.157±2.63 0.025±0.01 0.021±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003VU CIL_0003VU_0002 CGP 12:58211772-58269258

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004994 ISO somatostatin receptor activity
GO:0005515 IPI protein binding
GO:0005886 IDA plasma membrane
GO:0007186 IMP G-protein coupled receptor signaling pathway
GO:0007215 IDA glutamate receptor signaling pathway
GO:0007218 IDA neuropeptide signaling pathway
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000267377 SSTR1-002 protein_coding Homo_sapiens 0 1640
ENST00000610913 SSTR3-001 protein_coding Homo_sapiens 0.0000000007 71
ENST00000617123 SSTR3-002 protein_coding Homo_sapiens 0.0000000003 71

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