C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nudix (nucleoside diphosphate linked moiety X)-type motif 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000110827 Nudt1-003 ENSMUSG00000036639 10090 + 5:140331954-140337941 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000110827
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000110827 4.278±0.60 3.832±0.03 2.998±0.08 4.272±1.17 1.908±0.00 4.110±0.75 3.927±0.31 1.990±0.44 1.672±0.49 4.256±1.38 5.458±0.93 0.968±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000ZQ CIL_0000ZQ_0002 CGP 5:140008689-140331898
CIL_0000ZN CIL_0000ZN_0002 CGP 5:140327674-140338137
CIL_0000ZO CIL_0000ZO_0002 CGP 5:140331860-140389251

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0005739 ISS mitochondrion
GO:0005759 ISS mitochondrial matrix
GO:0006184 ISS GTP catabolic process
GO:0006200 ISS ATP catabolic process
GO:0006203 IDA dGTP catabolic process
GO:0006281 IEA DNA repair
GO:0008413 IDA 8-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity
GO:0016020 IEA membrane
GO:0030515 IDA snoRNA binding
GO:0031410 IEA cytoplasmic vesicle
GO:0035539 ISS 8-oxo-7,8-dihydrodeoxyguanosine triphosphate pyrophosphatase activity
GO:0042262 ISS DNA protection
GO:0046061 ISS dATP catabolic process
GO:0046872 IEA metal ion binding
GO:0047693 ISS ATP diphosphatase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000339737 NUDT1-005 protein_coding Homo_sapiens 0 387
ENST00000343985 NUDT1-004 protein_coding Homo_sapiens 0 388
ENST00000356714 NUDT1-001 protein_coding Homo_sapiens 0 387
ENST00000397046 NUDT1-002 protein_coding Homo_sapiens 0 387
ENST00000397048 NUDT1-003 protein_coding Homo_sapiens 0 388
ENST00000397049 NUDT1-201 protein_coding Homo_sapiens 0 387
ENST00000454650 NUDT1-006 protein_coding Homo_sapiens 7e-29 132
ENST00000471348 NUDT1-008 processed_transcript Homo_sapiens 9e-33 143

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