C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: interleukin 17 receptor C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000113062 Il17rc-001 ENSMUSG00000030281 10090 + 6:113471507-113483140 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastHeartKidneyMusclePlacentaTestisENSMUST00000113062
Transcript ID Adipose Adrenal Breast Heart Kidney Muscle Placenta Testis
ENSMUST00000113062 4.443±0.40 3.762±0.00 1.030±0.00 0.579±0.00 1.447±0.00 0.518±0.43 1.323±0.21 0.108±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001AC CIL_0001AC_0002 CGP 6:113458484-113483140
CIL_000599 CIL_000599_0002 CGP 6:113471427-113493338

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005886 IDA plasma membrane
GO:1900017 IGI positive regulation of cytokine production involved in inflammatory response

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295981 IL17RC-001 protein_coding Homo_sapiens 0 920
ENST00000383812 IL17RC-014 protein_coding Homo_sapiens 0 532
ENST00000403601 IL17RC-019 protein_coding Homo_sapiens 0 1090
ENST00000412901 IL17RC-017 nonsense_mediated_decay Homo_sapiens 8e-40 169
ENST00000413608 IL17RC-020 protein_coding Homo_sapiens 0 1026
ENST00000416074 IL17RC-201 protein_coding Homo_sapiens 0 789
ENST00000424206 IL17RC-028 nonsense_mediated_decay Homo_sapiens 0 477
ENST00000434756 IL17RC-009 nonsense_mediated_decay Homo_sapiens 0 206
ENST00000436503 IL17RC-011 protein_coding Homo_sapiens 0 632
ENST00000438091 IL17RC-010 protein_coding Homo_sapiens 0 213
ENST00000451165 IL17RC-016 nonsense_mediated_decay Homo_sapiens 0 333
ENST00000451231 IL17RC-021 nonsense_mediated_decay Homo_sapiens 0 294
ENST00000451271 IL17RC-006 nonsense_mediated_decay Homo_sapiens 0 774
ENST00000455057 IL17RC-022 protein_coding Homo_sapiens 0 532
ENST00000461995 IL17RC-029 retained_intron Homo_sapiens 0 355
ENST00000464406 IL17RC-030 retained_intron Homo_sapiens 0 189
ENST00000466046 IL17RC-018 retained_intron Homo_sapiens 0 532
ENST00000476810 IL17RC-008 nonsense_mediated_decay Homo_sapiens 0 348
ENST00000483582 IL17RC-002 retained_intron Homo_sapiens 0 532
ENST00000494365 IL17RC-003 retained_intron Homo_sapiens 0 532
ENST00000497387 IL17RC-007 retained_intron Homo_sapiens 0 300
ENST00000498214 IL17RC-004 processed_transcript Homo_sapiens 0 333

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