C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: potassium inwardly-rectifying channel, subfamily J, member 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000113212 Kcnj13-001 ENSMUSG00000079436 10090 - 1:87386363-87394729 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LungPlacentaENSMUST00000113212
Transcript ID Lung Placenta
ENSMUST00000113212 8.744±1.34 30.860±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003HW CIL_0003HW_0002 CGP 1:87264363-87450796
CIL_0003HP CIL_0003HP_0002 CGP 1:87326998-87450796
CIL_0003HQ CIL_0003HQ_0002 CGP 1:87386363-87475482

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005242 IEA inward rectifier potassium channel activity
GO:0016021 IEA integral component of membrane
GO:0034765 IEA regulation of ion transmembrane transport
GO:0071805 IEA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000233826 KCNJ13-001 protein_coding Homo_sapiens 0 1480
ENST00000409779 KCNJ13-003 protein_coding Homo_sapiens 0 752
ENST00000410029 KCNJ13-002 protein_coding Homo_sapiens 0 1432
ENST00000421778 GIGYF2-036 protein_coding Homo_sapiens 0 265
ENST00000438786 KCNJ13-004 protein_coding Homo_sapiens 0 750
ENST00000444142 KCNJ13-005 protein_coding Homo_sapiens 0 536
ENST00000463554 GIGYF2-011 processed_transcript Homo_sapiens 0 473
ENST00000473170 GIGYF2-033 processed_transcript Homo_sapiens 9e-31 137
ENST00000475530 GIGYF2-034 processed_transcript Homo_sapiens 6e-40 167

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