C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DIS3 mitotic control homolog (S. cerevisiae)-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000113890 Dis3l-004 ENSMUSG00000032396 10090 - 9:64307011-64340457 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000113890
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000113890 1.691±0.64 12.885±0.00 2.316±1.05 2.303±0.00 1.921±0.70 1.870±0.13 1.828±0.55 2.577±1.55 3.994±3.59 4.518±1.19 42.337±25.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008Q7 CIL_0008Q7_0002 VISTA 9:63744784-64346949
CIL_0004FF CIL_0004FF_0002 CGP 9:64281607-64341288

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000175 ISS 3'-5'-exoribonuclease activity
GO:0000177 ISS cytoplasmic exosome (RNase complex)
GO:0003723 IEA RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000319194 DIS3L-001 protein_coding Homo_sapiens 0 3286
ENST00000319212 DIS3L-004 protein_coding Homo_sapiens 0 3286
ENST00000524795 DIS3L-002 nonsense_mediated_decay Homo_sapiens 0 769
ENST00000525109 DIS3L-009 protein_coding Homo_sapiens 0 628
ENST00000525134 DIS3L-005 protein_coding Homo_sapiens 0 281
ENST00000530537 DIS3L-003 nonsense_mediated_decay Homo_sapiens 0 3046
ENST00000530615 DIS3L-007 protein_coding Homo_sapiens 0 449
ENST00000532293 DIS3L-008 processed_transcript Homo_sapiens 0.0000000000004 79
ENST00000532580 DIS3L-006 protein_coding Homo_sapiens 0 464
ENST00000562314 DIS3L-014 retained_intron Homo_sapiens 0 518
ENST00000564909 DIS3L-012 retained_intron Homo_sapiens 0 2316
ENST00000565281 DIS3L-011 retained_intron Homo_sapiens 0 1138

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