C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 219, member B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000114200 Fam219b-202 ENSMUSG00000032305 10090 + 9:57537528-57543187 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastLungOvaryPlacentaTestisENSMUST00000114200
Transcript ID Adipose Bladder Brain Breast Lung Ovary Placenta Testis
ENSMUST00000114200 6.011±0.00 6.499±0.15 3.089±0.00 5.394±0.00 4.478±0.19 4.490±1.94 4.180±0.74 0.938±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007UD CIL_0007UD_0002 VISTA 9:57506610-58107834
CIL_0002A1 CIL_0002A1_0002 CGP 9:57521232-57543187

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000357635 FAM219B-001 protein_coding Homo_sapiens 0 658
ENST00000562698 FAM219B-018 protein_coding Homo_sapiens 0 540
ENST00000563069 FAM219B-003 nonsense_mediated_decay Homo_sapiens 0 363
ENST00000563119 FAM219B-006 protein_coding Homo_sapiens 0 652
ENST00000563413 FAM219B-017 nonsense_mediated_decay Homo_sapiens 0 427
ENST00000563671 FAM219B-014 nonsense_mediated_decay Homo_sapiens 0 628
ENST00000563706 FAM219B-007 processed_transcript Homo_sapiens 0 350
ENST00000563877 FAM219B-019 nonsense_mediated_decay Homo_sapiens 0 433
ENST00000564019 FAM219B-015 nonsense_mediated_decay Homo_sapiens 0 359
ENST00000564857 FAM219B-008 retained_intron Homo_sapiens 0 326
ENST00000565772 FAM219B-004 protein_coding Homo_sapiens 0 545
ENST00000566132 FAM219B-012 nonsense_mediated_decay Homo_sapiens 0 292
ENST00000566194 FAM219B-009 nonsense_mediated_decay Homo_sapiens 0 425
ENST00000566894 FAM219B-005 retained_intron Homo_sapiens 0 298
ENST00000567388 FAM219B-013 nonsense_mediated_decay Homo_sapiens 0 274
ENST00000569524 FAM219B-002 nonsense_mediated_decay Homo_sapiens 0 433
ENST00000569761 FAM219B-010 nonsense_mediated_decay Homo_sapiens 0 202
ENST00000570143 FAM219B-016 nonsense_mediated_decay Homo_sapiens 0 279

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