C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: macrophage erythroblast attacher
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000114449 Maea-201 ENSMUSG00000079562 10090 + 5:33335572-33373294 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000114449
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000114449 47.929±4.33 68.881±1.83 62.821±10.71 50.260±14.85 41.816±17.08 72.319±2.07 35.133±4.30 49.795±4.68 32.865±10.08 55.602±2.50 20.099±1.00 82.262±22.99 83.574±14.42 39.413±14.82

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006LN CIL_0006LN_0002 CGP 5:33247724-33373294
CIL_0007TX CIL_0007TX_0002 VISTA 5:33275293-33875875
CIL_0006LM CIL_0006LM_0002 CGP 5:33335572-33419754

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IDA actin binding
GO:0005634 IEA nucleus
GO:0005819 IEA spindle
GO:0005826 IEA actomyosin contractile ring
GO:0005856 IEA cytoskeleton
GO:0005887 IEA integral component of plasma membrane
GO:0007010 IMP cytoskeleton organization
GO:0007049 IEA cell cycle
GO:0007155 IEA cell adhesion
GO:0015629 IDA actin cytoskeleton
GO:0016363 IEA nuclear matrix
GO:0033033 IEA negative regulation of myeloid cell apoptotic process
GO:0043249 IEA erythrocyte maturation
GO:0048821 IMP erythrocyte development
GO:0048822 IMP enucleate erythrocyte development
GO:0051301 IEA cell division

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264750 MAEA-003 protein_coding Homo_sapiens 0 878
ENST00000303400 MAEA-001 protein_coding Homo_sapiens 0 1596
ENST00000502558 MAEA-018 protein_coding Homo_sapiens 0 394
ENST00000503162 MAEA-010 retained_intron Homo_sapiens 0 785
ENST00000503653 MAEA-017 protein_coding Homo_sapiens 0 725
ENST00000503693 MAEA-005 processed_transcript Homo_sapiens 0 545
ENST00000505177 MAEA-002 protein_coding Homo_sapiens 0 798
ENST00000505839 MAEA-007 protein_coding Homo_sapiens 0 1402
ENST00000506530 MAEA-009 retained_intron Homo_sapiens 0 566
ENST00000508634 MAEA-015 retained_intron Homo_sapiens 0 315
ENST00000509254 MAEA-014 nonsense_mediated_decay Homo_sapiens 0 315
ENST00000509531 MAEA-020 nonsense_mediated_decay Homo_sapiens 0 710
ENST00000510794 MAEA-006 protein_coding Homo_sapiens 0 1480
ENST00000512289 MAEA-008 processed_transcript Homo_sapiens 0 785
ENST00000513301 MAEA-013 nonsense_mediated_decay Homo_sapiens 0 315
ENST00000514708 MAEA-004 protein_coding Homo_sapiens 0 761
ENST00000515766 MAEA-011 retained_intron Homo_sapiens 0 494

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