C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pregnancy upregulated non-ubiquitously expressed CaM kinase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000114472 Pnck-004 ENSMUSG00000002012 10090 - X:73655995-73660117 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000114472
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000114472 5.373±3.89 2.038±0.98 71.995±8.94 19.364±11.69 1.628±0.30 2.469±1.53 4.103±1.03 0.542±0.07 0.540±0.17 1.200±0.48 4.024±1.23 5.318±2.14 1.866±1.61 1.699±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001UZ CIL_0001UZ_0002 CGP X:73639419-73660117
CIL_0001UY CIL_0001UY_0002 CGP X:73655994-73682502

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004683 IEA calmodulin-dependent protein kinase activity
GO:0005516 IEA calmodulin binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005954 TAS calcium- and calmodulin-dependent protein kinase complex
GO:0006468 IEA protein phosphorylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000340888 PNCK-006 protein_coding Homo_sapiens 0 1282
ENST00000370142 PNCK-002 protein_coding Homo_sapiens 0 621
ENST00000370145 PNCK-022 protein_coding Homo_sapiens 0 1275
ENST00000370150 PNCK-001 protein_coding Homo_sapiens 0 1260
ENST00000422811 PNCK-014 protein_coding Homo_sapiens 0 878
ENST00000433470 PNCK-015 nonsense_mediated_decay Homo_sapiens 0 813
ENST00000439087 PNCK-005 protein_coding Homo_sapiens 0 876
ENST00000447676 PNCK-004 protein_coding Homo_sapiens 0 1277
ENST00000466074 PNCK-007 retained_intron Homo_sapiens 0 961
ENST00000466638 PNCK-021 retained_intron Homo_sapiens 3e-29 134
ENST00000472324 PNCK-003 retained_intron Homo_sapiens 0 490
ENST00000473680 PNCK-023 retained_intron Homo_sapiens 0 213
ENST00000488994 PNCK-024 retained_intron Homo_sapiens 0 547
ENST00000489536 PNCK-010 retained_intron Homo_sapiens 9e-18 95

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