C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hydrolethalus syndrome 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000115110 Hyls1-001 ENSMUSG00000050555 10090 - 9:35560820-35570398 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000115110
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000115110 1.199±0.43 1.615±0.37 0.872±0.02 4.241±1.68 1.739±0.45 1.049±0.36 0.363±0.10 0.562±0.16 1.242±0.94 0.613±0.15 1.580±0.65 2.704±1.12 30.356±4.81

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007W7 CIL_0007W7_0002 VISTA 9:35123876-35727017

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 ISA nucleus
GO:0005737 ISA cytoplasm
GO:0005813 IEA centrosome
GO:0005886 IEA plasma membrane
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000356438 HYLS1-001 protein_coding Homo_sapiens 0 904
ENST00000425380 HYLS1-002 protein_coding Homo_sapiens 0 904
ENST00000526028 HYLS1-003 protein_coding Homo_sapiens 0 904

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