C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: carboxypeptidase A5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000115139 Cpa5-003 ENSMUSG00000029788 10090 + 6:30612188-30631743 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverPlacentaTestisENSMUST00000115139
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Placenta Testis
ENSMUST00000115139 0.146±0.04 0.011±0.00 0.030±0.01 0.047±0.03 0.013±0.00 0.007±0.00 0.025±0.03 0.093±0.06 5.023±0.83

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PP CIL_0008PP_0002 VISTA 6:30335908-30937352
CIL_000275 CIL_000275_0002 CGP 6:30568369-30631745
CIL_000270 CIL_000270_0002 CGP 6:30611010-30645363

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004181 IEA metallocarboxypeptidase activity
GO:0005575 ND cellular_component
GO:0005576 IEA extracellular region
GO:0006508 IEA proteolysis
GO:0008233 IDA peptidase activity
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000393213 CPA5-003 protein_coding Homo_sapiens 0 1304
ENST00000431780 CPA5-007 protein_coding Homo_sapiens 0 1055
ENST00000461828 CPA5-008 protein_coding Homo_sapiens 0 1334
ENST00000463587 CPA5-010 protein_coding Homo_sapiens 0 425
ENST00000466363 CPA5-006 protein_coding Homo_sapiens 0 1336
ENST00000474905 CPA5-005 protein_coding Homo_sapiens 0 1336
ENST00000485477 CPA5-001 protein_coding Homo_sapiens 0 1336
ENST00000495736 CPA5-002 retained_intron Homo_sapiens 0 1050

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