C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane 4 L six family member 19
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000115149 Tm4sf19-201 ENSMUSG00000079625 10090 + 16:32400506-32408227 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000115149
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000115149 0.242±0.08 0.115±0.03 0.079±0.02 0.036±0.02 0.061±0.02 0.177±0.08 0.043±0.02 0.058±0.01 0.048±0.03 0.138±0.09 0.166±0.10 0.107±0.08 1.157±0.77

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QR CIL_0008QR_0002 VISTA 16:32268412-32870796

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000273695 TM4SF19-001 protein_coding Homo_sapiens 0 542
ENST00000442633 TM4SF19-TCTEX1D2-001 nonsense_mediated_decay Homo_sapiens 0 542
ENST00000446879 TM4SF19-002 protein_coding Homo_sapiens 0 527
ENST00000454715 TM4SF19-004 protein_coding Homo_sapiens 0 348

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