C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: UBX domain protein 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000115151 Ubxn7-201 ENSMUSG00000053774 10090 + 16:32332252-32393747 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000115151
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000115151 4.856±1.45 4.101±0.82 5.131±0.03 7.252±3.79 3.667±1.14 2.131±0.38 1.923±0.21 3.709±0.33 3.109±0.76 4.675±0.40 1.106±0.28 4.777±1.08 3.466±1.54 2.573±1.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QR CIL_0008QR_0002 VISTA 16:32268412-32870796

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0008134 IEA transcription factor binding
GO:0008150 ND biological_process
GO:0031625 IEA ubiquitin protein ligase binding
GO:0034098 IEA Cdc48p-Npl4p-Ufd1p AAA ATPase complex
GO:0043130 IEA ubiquitin binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000296328 UBXN7-001 protein_coding Homo_sapiens 0 2272
ENST00000381887 UBXN7-007 protein_coding Homo_sapiens 0 403
ENST00000413584 UBXN7-008 protein_coding Homo_sapiens 0 346
ENST00000428095 UBXN7-006 protein_coding Homo_sapiens 0 1515
ENST00000429160 UBXN7-003 nonsense_mediated_decay Homo_sapiens 0 1906
ENST00000493566 UBXN7-002 retained_intron Homo_sapiens 0 448

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