C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Ca2+-dependent activator protein for secretion 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000115356 Cadps2-004 ENSMUSG00000017978 10090 - 6:23408825-23839263 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastHeartLiverMuscleOvaryPlacentaTestisENSMUST00000115356
Transcript ID Adipose Breast Heart Liver Muscle Ovary Placenta Testis
ENSMUST00000115356 0.385±0.00 0.661±0.16 0.090±0.04 0.425±0.33 0.036±0.00 1.068±0.30 0.017±0.01 0.084±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00083M CIL_00083M_0002 VISTA 6:22971299-23575344
CIL_0003QO CIL_0003QO_0002 CGP 6:23245047-23839421
CIL_0001E7 CIL_0001E7_0002 CGP 6:23262773-23839421

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0008289 IEA lipid binding
GO:0009267 IEP cellular response to starvation
GO:0015031 IEA protein transport
GO:0016023 IDA cytoplasmic membrane-bounded vesicle
GO:0016082 IGI synaptic vesicle priming
GO:0030054 IEA cell junction
GO:0031410 IDA cytoplasmic vesicle
GO:0042734 IDA presynaptic membrane
GO:0045211 IDA postsynaptic membrane
GO:0045921 IDA positive regulation of exocytosis
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000313070 CADPS2-201 protein_coding Homo_sapiens 0 2682
ENST00000334010 CADPS2-202 protein_coding Homo_sapiens 0 2667
ENST00000397721 CADPS2-003 protein_coding Homo_sapiens 0 1430
ENST00000412584 CADPS2-002 protein_coding Homo_sapiens 0 2721
ENST00000449022 CADPS2-001 protein_coding Homo_sapiens 0 2660
ENST00000476131 CADPS2-005 processed_transcript Homo_sapiens 0 401
ENST00000615869 CADPS2-203 protein_coding Homo_sapiens 0 2667

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