C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RUN domain containing 3B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000115378 Rundc3b-002 ENSMUSG00000040570 10090 - 5:8492267-8622952 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000115378
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000115378 0.162±0.10 1.050±0.43 4.627±0.00 0.484±0.12 1.417±0.54 0.053±0.03 0.102±0.04 0.077±0.04 0.117±0.06 0.004±0.00 0.337±0.12 0.288±0.10 1.090±0.77

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000312373 RUNDC3B-008 retained_intron Homo_sapiens 0 909
ENST00000338056 RUNDC3B-001 protein_coding Homo_sapiens 0 1448
ENST00000394654 RUNDC3B-003 protein_coding Homo_sapiens 0 1829
ENST00000466676 RUNDC3B-006 processed_transcript Homo_sapiens 0 510
ENST00000476114 RUNDC3B-009 retained_intron Homo_sapiens 0 573
ENST00000489461 RUNDC3B-004 processed_transcript Homo_sapiens 0 717
ENST00000493037 RUNDC3B-002 protein_coding Homo_sapiens 0 1288
ENST00000496000 RUNDC3B-007 processed_transcript Homo_sapiens 0 436
ENST00000497788 RUNDC3B-005 processed_transcript Homo_sapiens 0 342

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