C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: fatty acid desaturase 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000115995 Fads3-201 ENSMUSG00000024664 10090 + 19:10041548-10059671 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000115995
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000115995 112.454±65.93 17.335±4.90 11.970±5.42 10.996±7.14 43.567±11.13 12.303±3.51 9.334±5.81 57.614±27.85 5.086±2.63 57.335±17.42 0.952±0.27 20.927±8.54 12.059±6.07 1.919±0.87

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005506 IEA iron ion binding
GO:0005575 ND cellular_component
GO:0005783 IEA endoplasmic reticulum
GO:0006633 IEA fatty acid biosynthetic process
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0016717 IEA oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water
GO:0020037 IEA heme binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000257261 FADS2-001 protein_coding Homo_sapiens 0 346
ENST00000278829 FADS3-001 protein_coding Homo_sapiens 0 1583
ENST00000278840 FADS2-003 protein_coding Homo_sapiens 0 388
ENST00000414624 FADS3-005 retained_intron Homo_sapiens 0 948
ENST00000522056 FADS2-002 protein_coding Homo_sapiens 0 348
ENST00000522359 FADS2-006 retained_intron Homo_sapiens 3e-40 171
ENST00000523235 FADS2-005 retained_intron Homo_sapiens 0 219
ENST00000525588 FADS3-002 protein_coding Homo_sapiens 0 985
ENST00000526294 FADS3-007 retained_intron Homo_sapiens 0 604
ENST00000527379 FADS3-008 protein_coding Homo_sapiens 0 686
ENST00000527697 FADS3-012 protein_coding Homo_sapiens 0 1197
ENST00000529404 FADS3-004 retained_intron Homo_sapiens 0 889
ENST00000529525 FADS3-011 processed_transcript Homo_sapiens 0 261
ENST00000531956 FADS3-006 protein_coding Homo_sapiens 0 865
ENST00000533676 FADS3-003 retained_intron Homo_sapiens 0 691
ENST00000534223 FADS3-013 protein_coding Homo_sapiens 0 852

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