C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Ets2 repressor factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000116343 Erf-002 ENSMUSG00000040857 10090 - 7:25245447-25250730 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainMuscleOvaryPlacentaTestisENSMUST00000116343
Transcript ID Brain Muscle Ovary Placenta Testis
ENSMUST00000116343 6.060±0.00 1.164±0.00 17.670±9.71 2.856±0.00 2.438±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000287 CIL_000287_0002 CGP 7:25242561-25294159

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000981 IBA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0001701 IMP in utero embryonic development
GO:0005634 IDA nucleus
GO:0006357 IBA regulation of transcription from RNA polymerase II promoter
GO:0006366 IBA transcription from RNA polymerase II promoter
GO:0010668 IMP ectodermal cell differentiation
GO:0043565 IEA sequence-specific DNA binding
GO:0060707 IMP trophoblast giant cell differentiation
GO:0060710 IMP chorio-allantoic fusion

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000091183 erfl3-201 protein_coding Danio_rerio 0 331
ENSDART00000134758 erfl3-001 protein_coding Danio_rerio 0 318
ENSDART00000146214 erfl1-001 protein_coding Danio_rerio 0 278
ENSDART00000124247 erfl1-201 protein_coding Danio_rerio 0 276
ENST00000222329 ERF-001 protein_coding Homo_sapiens 0 699
ENST00000440177 ERF-003 protein_coding Homo_sapiens 0 484
ENST00000593944 ERF-006 protein_coding Homo_sapiens 0 481
ENST00000594664 AC006486.9-001 protein_coding Homo_sapiens 0 222
ENST00000595448 ERF-008 retained_intron Homo_sapiens 6.99949e-42 174
ENST00000595941 ERF-005 processed_transcript Homo_sapiens 6.02558e-44 180
ENST00000596818 ERF-004 retained_intron Homo_sapiens 0 486
ENST00000597630 CTD-2575K13.6-001 processed_transcript Homo_sapiens 0 348
ENST00000598387 CTD-2575K13.6-002 transcribed_unprocessed_pseudogene Homo_sapiens 0 390
ENST00000598965 ERF-007 protein_coding Homo_sapiens 0 303

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