C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: septin 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000116423 Sept3-202 ENSMUSG00000022456 10090 + 15:82275247-82292057 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonHeartKidneyLiverMuscleOvaryTestisENSMUST00000116423
Transcript ID Adipose Brain Colon Heart Kidney Liver Muscle Ovary Testis
ENSMUST00000116423 0.135±0.00 47.624±15.73 0.161±0.00 0.107±0.02 0.068±0.00 0.047±0.02 0.159±0.08 0.161±0.10 2.945±0.55

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004B9 CIL_0004B9_0002 CGP 15:82274935-82314558

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005525 IEA GTP binding
GO:0007049 IEA cell cycle
GO:0030054 IEA cell junction
GO:0031105 IEA septin complex
GO:0045202 IEA synapse
GO:0051301 IEA cell division

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000396417 SEPT3-002 nonsense_mediated_decay Homo_sapiens 0 499
ENST00000396425 SEPT3-001 protein_coding Homo_sapiens 0 1890
ENST00000396426 SEPT3-003 protein_coding Homo_sapiens 0 1742
ENST00000406029 SEPT3-004 protein_coding Homo_sapiens 0 1199
ENST00000449288 SEPT3-006 protein_coding Homo_sapiens 0 833
ENST00000460267 SEPT3-005 retained_intron Homo_sapiens 0 425

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