C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 13410
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117058 Gm13410-001 ENSMUSG00000083116 10090 + 2:24178834-24180317 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000117058
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000117058 0.174±0.08 0.226±0.11 0.099±0.02 0.360±0.12 0.224±0.19 0.266±0.07 0.075±0.03 0.079±0.03 0.143±0.07 0.187±0.12 0.040±0.03 0.290±0.06 0.965±0.92 0.047±0.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000421811 DDX6P1-001 processed_pseudogene Homo_sapiens 0 1181
ENST00000428340 DDX6P1-001 processed_pseudogene Homo_sapiens 0 1192
ENST00000437197 DDX6P1-001 processed_pseudogene Homo_sapiens 0 1192
ENST00000440720 DDX6P1-001 processed_pseudogene Homo_sapiens 0 1192
ENST00000441966 DDX6P1-001 processed_pseudogene Homo_sapiens 0 1192
ENST00000445549 DDX6P1-001 processed_pseudogene Homo_sapiens 0 1190
ENST00000525082 DDX6-003 retained_intron Homo_sapiens 0 233
ENST00000526070 DDX6-002 protein_coding Homo_sapiens 0 1683
ENST00000529162 DDX6-004 retained_intron Homo_sapiens 0 457
ENST00000531971 DDX6-006 retained_intron Homo_sapiens 0 307
ENST00000533239 DDX6-005 retained_intron Homo_sapiens 0 235
ENST00000534980 DDX6-001 protein_coding Homo_sapiens 0 1683
ENST00000617381 DDX6-201 protein_coding Homo_sapiens 0 763
ENST00000619520 DDX6P2-001 processed_pseudogene Homo_sapiens 0 1279
ENST00000620157 DDX6-202 protein_coding Homo_sapiens 0 1683

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