C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 12 (potassium/chloride transporters), member 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117134 Slc12a8-005 ENSMUSG00000035506 10090 + 16:33596627-33663406 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastLiverLungMuscleOvaryPlacentaTestisENSMUST00000117134
Transcript ID Adipose Adrenal Breast Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000117134 0.214±0.00 0.184±0.00 0.110±0.02 0.032±0.02 0.182±0.00 0.047±0.00 3.548±2.66 0.662±0.76 0.498±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004UH CIL_0004UH_0002 CGP 16:33380775-33664135
CIL_0004RM CIL_0004RM_0002 CGP 16:33517328-33771576

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016020 IEA membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000393469 SLC12A8-001 protein_coding Homo_sapiens 0 835
ENST00000430155 SLC12A8-003 protein_coding Homo_sapiens 0 839
ENST00000465475 SLC12A8-006 processed_transcript Homo_sapiens 0 643
ENST00000465777 SLC12A8-011 processed_transcript Homo_sapiens 0 490
ENST00000469902 SLC12A8-004 protein_coding Homo_sapiens 0 835
ENST00000473262 SLC12A8-005 nonsense_mediated_decay Homo_sapiens 0 750
ENST00000479231 SLC12A8-008 retained_intron Homo_sapiens 0 339
ENST00000479352 SLC12A8-002 processed_transcript Homo_sapiens 0 832
ENST00000485849 SLC12A8-012 processed_transcript Homo_sapiens 0 219
ENST00000485954 SLC12A8-009 retained_intron Homo_sapiens 0 446
ENST00000495105 SLC12A8-013 processed_transcript Homo_sapiens 0 416

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