C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 5228
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117186 Gm5228-001 ENSMUSG00000084288 10090 + 17:47936090-47936446 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000117186
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000117186 0.240±0.07 0.478±0.20 0.379±0.12 0.269±0.05 1.359±0.17 1.464±0.79 0.414±0.28 0.145±0.01 0.345±0.22 0.640±0.23 2.970±1.65 0.376±0.20 0.417±0.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000963 CIL_000963_0002 VISTA 17:47571879-48173076
CIL_00093V CIL_00093V_0002 VISTA 17:47614773-48215356
CIL_0008XI CIL_0008XI_0002 VISTA 17:47688296-48291797
CIL_0008IB CIL_0008IB_0002 VISTA 17:47708185-48309224
CIL_0007QG CIL_0007QG_0002 VISTA 17:47710565-48311720
CIL_0008F3 CIL_0008F3_0002 VISTA 17:47757242-48358147

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000215754 MIF-001 protein_coding Homo_sapiens 0 311
ENST00000433835 AP000350.10-005 protein_coding Homo_sapiens 0 244
ENST00000465752 MIF-002 retained_intron Homo_sapiens 0.000000000000004 86
ENST00000498385 MIF-003 retained_intron Homo_sapiens 0 244
ENST00000613839 MIF-201 protein_coding Homo_sapiens 0 311

Loading