C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 13260
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117797 Gm13260-001 ENSMUSG00000082727 10090 - 2:11607414-11608282 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverOvaryPlacentaTestisENSMUST00000117797
Transcript ID Bladder Brain Liver Ovary Placenta Testis
ENSMUST00000117797 0.010±0.00 0.020±0.01 0.028±0.00 0.029±0.00 0.007±0.00 0.066±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000216407 RP11-81H14.3-001 processed_pseudogene Homo_sapiens 0 689
ENST00000435260 RP11-446E9.1-001 processed_pseudogene Homo_sapiens 0 750
ENST00000445930 PSMC6-001 protein_coding Homo_sapiens 0 767
ENST00000504847 RP11-1084J3.1-001 processed_pseudogene Homo_sapiens 0 483
ENST00000551328 PSMC6-014 retained_intron Homo_sapiens 0 217
ENST00000555175 PSMC6-012 nonsense_mediated_decay Homo_sapiens 5e-25 119
ENST00000557557 PSMC6-010 processed_transcript Homo_sapiens 2e-24 119
ENST00000557632 PSMC6-013 retained_intron Homo_sapiens 1e-25 121
ENST00000606149 PSMC6-018 protein_coding Homo_sapiens 0 767
ENST00000612399 PSMC6-201 protein_coding Homo_sapiens 0 767

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