C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 45, member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117997 Slc45a1-002 ENSMUSG00000039838 10090 - 4:150630047-150652097 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000117997
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000117997 0.008±0.00 0.181±0.13 0.020±0.00 4.940±3.38 0.021±0.00 0.202±0.14 0.016±0.01 0.031±0.00 0.003±0.00 0.028±0.01 0.067±0.02 0.044±0.00 0.077±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VW CIL_0007VW_0002 VISTA 4:150524120-151125978

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0016021 IEA integral component of membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000102760 slc45a1-202 protein_coding Danio_rerio 0 383
ENSDART00000134560 slc45a1-001 protein_coding Danio_rerio 0 383
ENST00000289877 SLC45A1-201 protein_coding Homo_sapiens 0 1991
ENST00000471889 SLC45A1-001 protein_coding Homo_sapiens 0 2043
ENST00000481265 SLC45A1-005 processed_transcript Homo_sapiens 0 501
ENST00000497660 SLC45A1-002 retained_intron Homo_sapiens 0 1144

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