C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitochondrial carrier homolog 1 (C. elegans)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118366 Mtch1-002 ENSMUSG00000024012 10090 - 17:29332076-29347904 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000118366
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000118366 90.573±11.59 79.027±12.49 59.374±3.10 70.220±25.84 70.726±28.08 112.879±8.68 48.504±2.39 83.687±11.17 31.943±4.00 106.074±1.99 17.655±3.46 84.034±26.72 33.846±15.83 10.798±0.69

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089L CIL_00089L_0002 VISTA 17:29133661-29735358
CIL_0002Y8 CIL_0002Y8_0002 CGP 17:29318877-29347904
CIL_0002Y4 CIL_0002Y4_0002 CGP 17:29332072-29379660

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IDA:ISS mitochondrion
GO:0005743 IEA mitochondrial inner membrane
GO:0006810 IEA transport
GO:0006919 ISS activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0016021 IEA integral component of membrane
GO:0043065 ISS positive regulation of apoptotic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000373616 MTCH1-001 protein_coding Homo_sapiens 0 1539
ENST00000373627 MTCH1-008 protein_coding Homo_sapiens 0 1157
ENST00000405630 RP11-390P2.2-001 processed_pseudogene Homo_sapiens 0 782
ENST00000418541 MTCH1-003 protein_coding Homo_sapiens 0 599
ENST00000460219 MTCH1-005 protein_coding Homo_sapiens 0 1293
ENST00000471737 MTCH1-004 processed_transcript Homo_sapiens 0 383
ENST00000492754 MTCH1-006 processed_transcript Homo_sapiens 1e-37 159
ENST00000538808 MTCH1-201 protein_coding Homo_sapiens 0 1301
ENST00000540985 RP11-504G3.4-001 transcribed_processed_pseudogene Homo_sapiens 0 276

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