C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: EGF-like and EMI domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118531 Egfem1-003 ENSMUSG00000063600 10090 + 3:29082771-29690510 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000118531
Transcript ID Adipose Adrenal Brain Breast Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000118531 0.063±0.00 0.163±0.06 1.622±0.00 0.015±0.00 0.064±0.00 0.091±0.00 0.034±0.01 0.011±0.00 0.045±0.04 0.077±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000711 CIL_000711_0002 CGP 3:29082023-30548008

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000382864 EGFEM1P-008 processed_transcript Homo_sapiens 1.00053e-42 178
ENST00000431685 EGFEM1P-001 unitary_pseudogene Homo_sapiens 0 957
ENST00000461151 EGFEM1P-010 processed_transcript Homo_sapiens 5.00264e-43 178
ENST00000483846 EGFEM1P-007 processed_transcript Homo_sapiens 1.99965e-42 178
ENST00000486295 EGFEM1P-012 processed_transcript Homo_sapiens 7.00649e-43 178
ENST00000488647 EGFEM1P-013 processed_transcript Homo_sapiens 7.00649e-43 178
ENST00000491953 EGFEM1P-009 processed_transcript Homo_sapiens 5.00264e-43 178
ENST00000502332 EGFEM1P-004 processed_transcript Homo_sapiens 2e-33 147
ENST00000502778 EGFEM1P-002 processed_transcript Homo_sapiens 5e-34 148
ENST00000506760 EGFEM1P-005 processed_transcript Homo_sapiens 0 320
ENST00000511230 EGFEM1P-003 processed_transcript Homo_sapiens 2e-33 147

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