C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Max dimerization protein 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119171 Mxd4-002 ENSMUSG00000037235 10090 - 5:34176579-34187720 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonLiverOvaryPlacentaTestisENSMUST00000119171
Transcript ID Adrenal Brain Colon Liver Ovary Placenta Testis
ENSMUST00000119171 55.011±16.86 25.050±0.00 19.422±0.74 1.989±0.00 49.385±14.45 40.152±22.87 38.924±5.61

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000SO CIL_0000SO_0002 CGP 5:34153921-34187720
CIL_0000QO CIL_0000QO_0002 CGP 5:34173887-34288449

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IDA DNA binding
GO:0005515 IPI protein binding
GO:0045892 IGI negative regulation of transcription, DNA-templated
GO:0046983 IEA protein dimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000337190 MXD4-001 protein_coding Homo_sapiens 0 702
ENST00000510822 MXD4-004 nonsense_mediated_decay Homo_sapiens 0 268
ENST00000513372 MXD4-003 retained_intron Homo_sapiens 0 701
ENST00000513380 MXD4-006 nonsense_mediated_decay Homo_sapiens 0 379
ENST00000515378 MXD4-005 processed_transcript Homo_sapiens 0 268

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