C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitochondrial fission regulator 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119865 Mtfr1-003 ENSMUSG00000027601 10090 + 3:19187347-19219370 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonOvaryPlacentaTestisENSMUST00000119865
Transcript ID Adipose Adrenal Breast Colon Ovary Placenta Testis
ENSMUST00000119865 1.876±0.00 5.859±1.64 3.577±0.00 3.321±0.00 6.064±2.34 7.907±1.11 49.148±9.66

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005LS CIL_0005LS_0003 CGP 3:19132146-19220817
CIL_0005LR CIL_0005LR_0003 CGP 3:19187327-19311322

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000266 ISS mitochondrial fission
GO:0005739 IDA mitochondrion
GO:0007005 ISS mitochondrion organization
GO:0009060 IMP aerobic respiration

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262146 MTFR1-003 protein_coding Homo_sapiens 0 966
ENST00000424808 MTFR1-005 retained_intron Homo_sapiens 0 835
ENST00000517944 MTFR1-009 processed_transcript Homo_sapiens 0 708
ENST00000518636 MTFR1-013 processed_transcript Homo_sapiens 3e-31 139
ENST00000522239 MTFR1-010 processed_transcript Homo_sapiens 0 340
ENST00000523170 MTFR1-008 processed_transcript Homo_sapiens 9e-31 137
ENST00000523222 MTFR1-012 nonsense_mediated_decay Homo_sapiens 0 233

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