C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: additional sex combs like 3 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120223 Asxl3-001 ENSMUSG00000045215 10090 + 18:22345089-22530015 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000120223
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000120223 0.190±0.15 0.028±0.02 0.014±0.00 1.517±1.46 0.084±0.02 0.058±0.01 0.055±0.01 0.098±0.01 0.041±0.01 0.053±0.03 0.020±0.01 0.070±0.03 0.050±0.03 0.113±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004PA CIL_0004PA_0002 CGP 18:21810897-22530227
CIL_0006PC CIL_0006PC_0002 CGP 18:22344883-23041653

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003677 IEA DNA binding
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000269197 ASXL3-002 protein_coding Homo_sapiens 0 6069
ENST00000585426 ASXL3-010 nonsense_mediated_decay Homo_sapiens 0 542
ENST00000586327 ASXL3-008 protein_coding Homo_sapiens 0 363
ENST00000586596 ASXL3-015 protein_coding Homo_sapiens 0 501
ENST00000586948 ASXL3-007 processed_transcript Homo_sapiens 0 350
ENST00000588038 ASXL3-009 nonsense_mediated_decay Homo_sapiens 0 233
ENST00000588741 ASXL3-011 nonsense_mediated_decay Homo_sapiens 0 695
ENST00000590189 ASXL3-004 protein_coding Homo_sapiens 0 481
ENST00000590225 ASXL3-012 nonsense_mediated_decay Homo_sapiens 0 604
ENST00000590973 ASXL3-014 nonsense_mediated_decay Homo_sapiens 0 652
ENST00000592288 ASXL3-001 nonsense_mediated_decay Homo_sapiens 0 2460
ENST00000592349 ASXL3-006 processed_transcript Homo_sapiens 0 228
ENST00000592541 ASXL3-005 nonsense_mediated_decay Homo_sapiens 0 907
ENST00000593195 ASXL3-003 nonsense_mediated_decay Homo_sapiens 0 710
ENST00000593235 ASXL3-013 nonsense_mediated_decay Homo_sapiens 0 468

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