C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: 3-hydroxybutyrate dehydrogenase, type 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120397 Bdh2-001 ENSMUSG00000028167 10090 + 3:135281221-135304426 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000120397
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000120397 3.129±1.83 0.347±0.20 3.942±0.60 0.682±0.09 1.236±0.47 0.612±0.17 0.200±0.09 80.706±8.11 2.510±2.51 0.359±0.08 0.425±0.18 2.303±0.91 0.803±0.51 0.662±0.33

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003858 ISS 3-hydroxybutyrate dehydrogenase activity
GO:0005737 ISS cytoplasm
GO:0006635 ISS fatty acid beta-oxidation
GO:0016628 IMP oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
GO:0019290 IMP siderophore biosynthetic process
GO:0042168 ISS heme metabolic process
GO:0051287 ISS NAD binding
GO:0055072 IMP iron ion homeostasis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000296424 BDH2-001 protein_coding Homo_sapiens 0 784
ENST00000464039 BDH2-003 retained_intron Homo_sapiens 0 484
ENST00000475058 BDH2-004 retained_intron Homo_sapiens 0 484
ENST00000492366 BDH2-002 retained_intron Homo_sapiens 0 484
ENST00000504285 BDH2-007 protein_coding Homo_sapiens 0 451
ENST00000506521 BDH2-008 nonsense_mediated_decay Homo_sapiens 0 399
ENST00000509245 BDH2-006 protein_coding Homo_sapiens 0 394
ENST00000602288 BDH2P1-001 processed_pseudogene Homo_sapiens 0 717

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