C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 15368
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120438 Gm15368-001 ENSMUSG00000081488 10090 + 1:88186662-88187519 unprocessed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000120438
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000120438 0.232±0.10 0.333±0.00 1.644±0.18 0.020±0.00 0.308±0.24 2.119±0.74 0.036±0.00 0.177±0.13 0.373±0.31 0.138±0.10 0.319±0.16 0.241±0.07 0.050±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007HK CIL_0007HK_0002 CGP 1:87945119-88219004
CIL_0004L1 CIL_0004L1_000I CGP 1:88055388-88219004
CIL_0004L1 CIL_0004L1_000J CGP 1:88070800-88219004
CIL_0004L1 CIL_0004L1_000E CGP 1:88087813-88220002
CIL_0004L1 CIL_0004L1_000G CGP 1:88095062-88220002
CIL_0004L1 CIL_0004L1_000H CGP 1:88103252-88219003
CIL_0004L1 CIL_0004L1_000D CGP 1:88134809-88218997
CIL_0004L1 CIL_0004L1_000F CGP 1:88166012-88218997

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000373409 UGT1A4-001 protein_coding Homo_sapiens 0 281
ENST00000373414 UGT1A5-001 protein_coding Homo_sapiens 0 298
ENST00000450233 UGT1A4-002 nonsense_mediated_decay Homo_sapiens 0 281
ENST00000454886 UGT1A2P-001 unprocessed_pseudogene Homo_sapiens 0 329
ENST00000482026 UGT1A3-001 protein_coding Homo_sapiens 0 348
ENST00000609767 UGT1A3-201 protein_coding Homo_sapiens 0 348

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