C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger and SCAN domain containing 22
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120809 Zscan22-002 ENSMUSG00000054715 10090 + 7:12897841-12907537 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaENSMUST00000120809
Transcript ID Ovary Placenta
ENSMUST00000120809 2.441±0.00 0.947±0.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000329665 ZSCAN22-001 protein_coding Homo_sapiens 0 1016
ENST00000341976 ZNF70-001 protein_coding Homo_sapiens 4e-22 111
ENST00000439330 RP3-393P12.1-001 processed_pseudogene Homo_sapiens 0.00009 53

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