C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: BR serine/threonine kinase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120836 Brsk1-002 ENSMUSG00000035390 10090 + 7:4690604-4715981 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastHeartLiverLungMuscleOvaryPlacentaENSMUST00000120836
Transcript ID Adipose Breast Heart Liver Lung Muscle Ovary Placenta
ENSMUST00000120836 0.382±0.00 0.198±0.00 0.269±0.02 0.113±0.06 0.374±0.04 0.168±0.06 1.465±0.74 0.378±0.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000A2 CIL_0000A2_0002 CGP 7:4660521-4715997
CIL_00009Z CIL_00009Z_0002 CGP 7:4690604-4725249

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0006468 IEA protein phosphorylation
GO:0030010 IGI establishment of cell polarity
GO:0030182 IGI neuron differentiation
GO:0048812 IGI neuron projection morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000309383 BRSK1-001 protein_coding Homo_sapiens 0 3520
ENST00000326848 BRSK1-003 protein_coding Homo_sapiens 0 2418
ENST00000585418 BRSK1-002 protein_coding Homo_sapiens 0 1293
ENST00000586626 BRSK1-007 retained_intron Homo_sapiens 0 335
ENST00000588584 BRSK1-008 processed_transcript Homo_sapiens 0 761
ENST00000590333 BRSK1-004 protein_coding Homo_sapiens 0 3725
ENST00000591774 BRSK1-006 protein_coding Homo_sapiens 0 608
ENST00000592539 BRSK1-005 nonsense_mediated_decay Homo_sapiens 0 396

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