C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: apolipoprotein A-V
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121598 Apoa5-001 ENSMUSG00000032079 10090 + 9:46268633-46271919 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverLungPlacentaENSMUST00000121598
Transcript ID Liver Lung Placenta
ENSMUST00000121598 0.089±0.06 0.261±0.00 0.142±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RC CIL_0007RC_0002 VISTA 9:45818249-46421546
CIL_0008EK CIL_0008EK_0002 VISTA 9:46081147-46681838

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005543 IEA phospholipid binding
GO:0005615 IEA extracellular space
GO:0006641 IMP triglyceride metabolic process
GO:0008047 IEA enzyme activator activity
GO:0008201 IEA heparin binding
GO:0009725 IEA response to hormone
GO:0010898 IEA positive regulation of triglyceride catabolic process
GO:0010902 IEA positive regulation of very-low-density lipoprotein particle remodeling
GO:0019433 IEA triglyceride catabolic process
GO:0019899 IEA enzyme binding
GO:0031100 IEA organ regeneration
GO:0031210 IEA phosphatidylcholine binding
GO:0034361 IEA very-low-density lipoprotein particle
GO:0034364 IEA high-density lipoprotein particle
GO:0034370 IMP triglyceride-rich lipoprotein particle remodeling
GO:0035473 IEA lipase binding
GO:0042157 IEA lipoprotein metabolic process
GO:0042246 IEA tissue regeneration
GO:0042627 IEA chylomicron
GO:0042632 IEA cholesterol homeostasis
GO:0045723 IEA positive regulation of fatty acid biosynthetic process
GO:0050750 IEA low-density lipoprotein particle receptor binding
GO:0050996 IEA positive regulation of lipid catabolic process
GO:0051006 IEA positive regulation of lipoprotein lipase activity
GO:0055090 IMP acylglycerol homeostasis
GO:0060229 IEA lipase activator activity
GO:0060230 IEA lipoprotein lipase activator activity
GO:0070325 IEA lipoprotein particle receptor binding
GO:0070328 IEA triglyceride homeostasis

Homologs

No Homologs available.

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