C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: C1q and tumor necrosis factor related protein 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121872 C1qtnf7-003 ENSMUSG00000061535 10090 + 5:43601922-43616586 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000121872
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000121872 3.229±0.09 0.641±0.24 5.100±0.41 0.083±0.00 1.837±0.36 0.696±0.25 1.648±0.64 1.367±0.39 0.479±0.19 6.040±2.09 0.158±0.04 4.615±2.41 0.286±0.32 0.279±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00026K CIL_00026K_0002 CGP 5:43233463-43618817
CIL_0003DZ CIL_0003DZ_0003 CGP 5:43515569-43740972

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005581 IEA collagen trimer
GO:0005615 IDA extracellular space
GO:0051260 IDA protein homooligomerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295297 C1QTNF7-001 protein_coding Homo_sapiens 0 1057
ENST00000429690 C1QTNF7-201 protein_coding Homo_sapiens 0 1051
ENST00000444304 C1QTNF7-002 protein_coding Homo_sapiens 0 1074

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