C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: VPS9 domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000122363 Vps9d1-001 ENSMUSG00000001062 10090 - 8:123242356-123254348 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00005Y CIL_00005Y_0002 CGP 8:123232255-123254348
CIL_00005Z CIL_00005Z_0002 CGP 8:123242356-123269745

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000389386 VPS9D1-002 protein_coding Homo_sapiens 0 913
ENST00000561976 VPS9D1-001 protein_coding Homo_sapiens 0 765
ENST00000563798 VPS9D1-003 nonsense_mediated_decay Homo_sapiens 0 368
ENST00000565023 VPS9D1-007 protein_coding Homo_sapiens 0 630
ENST00000567379 VPS9D1-005 retained_intron Homo_sapiens 0 398
ENST00000568691 VPS9D1-004 retained_intron Homo_sapiens 0 448
ENST00000614968 VPS9D1-201 protein_coding Homo_sapiens 0 765

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