C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sel-1 suppressor of lin-12-like 2 (C. elegans)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000122367 Sel1l2-001 ENSMUSG00000074764 10090 - 2:140229855-140389704 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastLiverMuscleOvaryTestisENSMUST00000122367
Transcript ID Breast Liver Muscle Ovary Testis
ENSMUST00000122367 0.037±0.01 0.002±0.00 0.064±0.04 0.086±0.02 12.321±7.69

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002DD CIL_0002DD_0002 CGP 2:140170649-140389706
CIL_0002DE CIL_0002DE_0002 CGP 2:140229855-142392966

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000284951 SEL1L2-002 protein_coding Homo_sapiens 0 2383
ENST00000378072 SEL1L2-007 protein_coding Homo_sapiens 0 1598
ENST00000423870 SEL1L2-003 nonsense_mediated_decay Homo_sapiens 0 2071
ENST00000475649 SEL1L2-009 nonsense_mediated_decay Homo_sapiens 0 285
ENST00000476952 SEL1L2-006 processed_transcript Homo_sapiens 0 189
ENST00000482196 SEL1L2-008 processed_transcript Homo_sapiens 0 281
ENST00000486903 SEL1L2-001 processed_transcript Homo_sapiens 0 1511
ENST00000492548 SEL1L2-010 processed_transcript Homo_sapiens 5.00264e-43 178

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