C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: spermatogenesis associated 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000123421 Spata1-003 ENSMUSG00000028188 10090 - 3:146469626-146483525 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaTestisENSMUST00000123421
Transcript ID Ovary Placenta Testis
ENSMUST00000123421 2.802±0.00 2.854±1.86 101.081±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000460286 SPATA1-004 processed_transcript Homo_sapiens 0 226
ENST00000490879 SPATA1-008 processed_transcript Homo_sapiens 0 396
ENST00000554297 SPATA1-009 transcribed_unprocessed_pseudogene Homo_sapiens 0 368

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