C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tubulin folding cofactor E-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000125995 Tbcel-005 ENSMUSG00000037287 10090 - 9:42412316-42457599 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000125995
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000125995 3.068±0.00 4.676±1.01 3.207±1.42 1.633±0.91 1.072±0.33 1.754±0.59 3.722±1.60 8.348±5.79 5.037±1.32 2.817±0.93 5.857±4.41 1.116±0.87 1.018±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003CG CIL_0003CG_0002 CGP 9:42329619-42507809

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005829 TAS cytosol
GO:0005856 IEA cytoskeleton
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000284259 TBCEL-002 nonsense_mediated_decay Homo_sapiens 0 1264
ENST00000422003 TBCEL-001 protein_coding Homo_sapiens 0 1705
ENST00000524726 TBCEL-006 protein_coding Homo_sapiens 0 920
ENST00000529397 TBCEL-005 protein_coding Homo_sapiens 0 1585
ENST00000531148 TBCEL-003 nonsense_mediated_decay Homo_sapiens 0 793
ENST00000533134 TBCEL-008 protein_coding Homo_sapiens 0 475
ENST00000533169 TBCEL-009 retained_intron Homo_sapiens 0 1081
ENST00000533712 TBCEL-007 nonsense_mediated_decay Homo_sapiens 0 490

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