C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | solute carrier family 5 (sodium-dependent vitamin transporter), member 6 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000127693  |
Slc5a6-006 |
ENSMUSG00000006641 |
10090 | - |
5:31039352-31042605  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0000EJ | CIL_0000EJ_0002 | CGP | 5:30968677-31048924 |
| CIL_0000EI | CIL_0000EI_0002 | CGP | 5:31036036-31054633 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005215 | IEA | transporter activity |
| GO:0016021 | IEA | integral component of membrane |
| GO:0055085 | IEA | transmembrane transport |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000310574
|
SLC5A6-001 | protein_coding | Homo_sapiens | 0 | 333 |
|
ENST00000408041
|
SLC5A6-003 | protein_coding | Homo_sapiens | 0 | 333 |
|
ENST00000412471
|
SLC5A6-004 | protein_coding | Homo_sapiens | 9e-38 | 161 |
|
ENST00000445802
|
SLC5A6-008 | nonsense_mediated_decay | Homo_sapiens | 0 | 193 |
|
ENST00000464538
|
SLC5A6-013 | retained_intron | Homo_sapiens | 0 | 237 |
|
ENST00000488743
|
SLC5A6-002 | retained_intron | Homo_sapiens | 0 | 333 |
