C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hematopoietically expressed homeobox
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000128184 Hhex-002 ENSMUSG00000024986 10090 + 19:37436739-37440672 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastHeartMuscleOvaryPlacentaTestisENSMUST00000128184
Transcript ID Brain Breast Heart Muscle Ovary Placenta Testis
ENSMUST00000128184 1.298±0.00 1.300±0.00 0.420±0.00 0.383±0.23 4.899±0.45 1.454±1.17 1.560±1.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VX CIL_0007VX_0002 VISTA 19:37192022-37797349
CIL_00018T CIL_00018T_0002 CGP 19:37376403-37440731
CIL_0000ZV CIL_0000ZV_0002 CGP 19:37434810-37683245

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0001570 IMP vasculogenesis
GO:0001701 IMP in utero embryonic development
GO:0001889 IMP liver development
GO:0002009 IMP morphogenesis of an epithelium
GO:0002573 IMP myeloid leukocyte differentiation
GO:0003682 IDA chromatin binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006357 IMP regulation of transcription from RNA polymerase II promoter
GO:0007165 IMP signal transduction
GO:0007492 IMP endoderm development
GO:0009887 IMP organ morphogenesis
GO:0022027 IMP interkinetic nuclear migration
GO:0030097 IMP hemopoiesis
GO:0030183 IMP B cell differentiation
GO:0030878 IMP thyroid gland development
GO:0030900 IMP forebrain development
GO:0031016 IMP pancreas development
GO:0035050 IMP embryonic heart tube development
GO:0035264 IMP multicellular organism growth
GO:0042127 IMP regulation of cell proliferation
GO:0048568 IMP embryonic organ development
GO:0048729 IMP tissue morphogenesis
GO:0048853 IMP forebrain morphogenesis
GO:0060431 IMP primary lung bud formation
GO:0061009 IMP common bile duct development
GO:0061010 IMP gall bladder development
GO:0061011 IMP hepatic duct development
GO:0061017 IMP hepatoblast differentiation
GO:0070365 IMP hepatocyte differentiation
GO:0090009 IGI primitive streak formation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000282728 HHEX-001 protein_coding Homo_sapiens 0 531
ENST00000472590 HHEX-002 protein_coding Homo_sapiens 0 531
ENST00000492654 HHEX-003 protein_coding Homo_sapiens 0 510

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