C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neuroblastoma ras oncogene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000128264 Nras-002 ENSMUSG00000027852 10090 + 3:103058903-103067906 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryTestisENSMUST00000128264
Transcript ID Ovary Testis
ENSMUST00000128264 1.920±0.00 11.828±0.75

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006WS CIL_0006WS_0002 CGP 3:103058339-103099714

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 TAS GTPase activity
GO:0005525 IEA GTP binding
GO:0006184 IEA GTP catabolic process
GO:0007265 TAS Ras protein signal transduction
GO:0008284 IGI positive regulation of cell proliferation
GO:0008542 IGI visual learning
GO:0016020 IDA membrane
GO:0030036 IGI actin cytoskeleton organization
GO:0032228 IGI regulation of synaptic transmission, GABAergic
GO:0032403 ISO protein complex binding
GO:0035022 IGI positive regulation of Rac protein signal transduction
GO:0043524 IGI negative regulation of neuron apoptotic process
GO:0045596 IDA negative regulation of cell differentiation
GO:0048169 IGI regulation of long-term neuronal synaptic plasticity
GO:0048642 IDA negative regulation of skeletal muscle tissue development
GO:0051146 IGI striated muscle cell differentiation
GO:0051726 TAS regulation of cell cycle
GO:0060441 IDA epithelial tube branching involved in lung morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000013816 zgc:55558-001 protein_coding Danio_rerio 0 270
ENSDART00000100961 zgc:55558-002 protein_coding Danio_rerio 0 270
ENSDART00000141875 zgc:55558-003 processed_transcript Danio_rerio 1e-34 152
ENST00000369535 NRAS-001 protein_coding Homo_sapiens 0 773

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