C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myosin IXa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000128341 Myo9a-003 ENSMUSG00000039585 10090 + 9:59750896-59928866 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonLiverMuscleOvaryPlacentaTestisENSMUST00000128341
Transcript ID Adrenal Brain Breast Colon Liver Muscle Ovary Placenta Testis
ENSMUST00000128341 0.244±0.09 3.041±1.54 0.448±0.00 0.476±0.13 0.306±0.15 0.331±0.09 0.992±0.35 0.933±0.43 3.729±0.79

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005F4 CIL_0005F4_0002 CGP 9:59734259-59928866

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003774 IEA motor activity
GO:0003779 IEA actin binding
GO:0005096 IEA GTPase activator activity
GO:0005524 IEA ATP binding
GO:0008152 IEA metabolic process
GO:0016021 IEA integral component of membrane
GO:0016459 IEA myosin complex
GO:0035556 IEA intracellular signal transduction
GO:0043547 IEA positive regulation of GTPase activity
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000039810 myo9aa-201 protein_coding Danio_rerio 0 1074
ENST00000356056 MYO9A-001 protein_coding Homo_sapiens 0 9276
ENST00000424560 MYO9A-201 protein_coding Homo_sapiens 0 3417
ENST00000444904 MYO9A-202 protein_coding Homo_sapiens 0 9040
ENST00000561618 MYO9A-004 protein_coding Homo_sapiens 0 3083
ENST00000563542 MYO9A-006 processed_transcript Homo_sapiens 0 4169
ENST00000563648 MYO9A-009 retained_intron Homo_sapiens 0 268
ENST00000563925 MYO9A-008 retained_intron Homo_sapiens 0 466
ENST00000564571 MYO9A-015 protein_coding Homo_sapiens 0 9086
ENST00000564699 MYO9A-016 retained_intron Homo_sapiens 0 833
ENST00000564931 MYO9A-018 protein_coding Homo_sapiens 0 359
ENST00000566744 MYO9A-010 processed_transcript Homo_sapiens 0 496
ENST00000566885 MYO9A-002 protein_coding Homo_sapiens 0 2501
ENST00000567095 MYO9A-011 retained_intron Homo_sapiens 0 396
ENST00000567560 MYO9A-003 retained_intron Homo_sapiens 0 3504
ENST00000568042 MYO9A-007 protein_coding Homo_sapiens 0 832
ENST00000568438 MYO9A-005 nonsense_mediated_decay Homo_sapiens 0 442
ENST00000568481 MYO9A-017 protein_coding Homo_sapiens 0 547
ENST00000569314 MYO9A-019 protein_coding Homo_sapiens 0 640

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