C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pregnancy upregulated non-ubiquitously expressed CaM kinase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000129106 Pnck-003 ENSMUSG00000002012 10090 - X:73656251-73657831 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonKidneyLiverMuscleOvaryTestisENSMUST00000129106
Transcript ID Brain Breast Colon Kidney Liver Muscle Ovary Testis
ENSMUST00000129106 4.348±0.00 1.138±0.00 1.261±0.00 0.197±0.00 0.048±0.01 1.567±0.28 2.752±1.43 0.744±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001UZ CIL_0001UZ_0002 CGP X:73639419-73660117
CIL_0001UY CIL_0001UY_0002 CGP X:73655994-73682502

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000340888 PNCK-006 protein_coding Homo_sapiens 0 490
ENST00000370142 PNCK-002 protein_coding Homo_sapiens 0 490
ENST00000370145 PNCK-022 protein_coding Homo_sapiens 0 490
ENST00000370150 PNCK-001 protein_coding Homo_sapiens 0 470
ENST00000422811 PNCK-014 protein_coding Homo_sapiens 0 278
ENST00000433470 PNCK-015 nonsense_mediated_decay Homo_sapiens 0 278
ENST00000439087 PNCK-005 protein_coding Homo_sapiens 0 278
ENST00000447676 PNCK-004 protein_coding Homo_sapiens 0 490
ENST00000466074 PNCK-007 retained_intron Homo_sapiens 0 490
ENST00000466638 PNCK-021 retained_intron Homo_sapiens 1.00053e-42 178
ENST00000472324 PNCK-003 retained_intron Homo_sapiens 0 734
ENST00000473680 PNCK-023 retained_intron Homo_sapiens 0 457
ENST00000488994 PNCK-024 retained_intron Homo_sapiens 0 416
ENST00000489536 PNCK-010 retained_intron Homo_sapiens 9e-18 95

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