C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glycerol kinase 5 (putative)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000129774 Gk5-003 ENSMUSG00000041440 10090 + 9:96119432-96182810 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENSMUST00000129774
Transcript ID Adrenal Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENSMUST00000129774 0.947±0.34 0.868±0.00 1.003±0.65 1.093±0.00 0.389±0.06 1.105±0.23 0.486±0.00 0.243±0.00 1.540±0.22 2.235±0.01 0.433±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001B7 CIL_0001B7_0002 CGP 9:95954760-96184608
CIL_0008I1 CIL_0008I1_0002 VISTA 9:96080125-96682941

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000392993 GK5-001 protein_coding Homo_sapiens 0 1188
ENST00000460515 GK5-004 retained_intron Homo_sapiens 0 743
ENST00000463349 GK5-011 nonsense_mediated_decay Homo_sapiens 0 396
ENST00000480757 GK5-003 nonsense_mediated_decay Homo_sapiens 0 743
ENST00000486459 GK5-013 protein_coding Homo_sapiens 0 436
ENST00000492097 GK5-005 nonsense_mediated_decay Homo_sapiens 0 494

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